[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 19 items for (author: diberto & jf)

EMDB-29301:
Neurotensin receptor allosterism revealed in complex with a biased allosteric modulator
Method: single particle / : Krumm BE, Diberto JF, Olsen RHJ, Kang H, Slocum ST, Zhang S, Strachan RT, Fay JF, Roth BL

EMDB-29302:
CryoEM structure of Go-coupled NTSR1 with a biased allosteric modulator
Method: single particle / : Krumm BE, DiBerto JF, Olsen RHJ, Kang H, Slocum ST, Zhang S, Strachan RT, Fay JF, Roth BL

EMDB-29303:
CryoEM structure of Go-coupled NTSR1
Method: single particle / : Krumm BE, DiBerto JF, Olsen RHJ, Kang H, Slocum ST, Zhang S, Strachan RT, Fay JF, Roth BL

EMDB-33241:
Cryo-EM Structure of Human Niacin Receptor HCA2-Gi protein complex
Method: single particle / : Yang Y, Kang HJ, Gao RG, Wang JJ, Han GW, DiBerto JF, Wu LJ, Tong JH, Qu L, Wu YR, Pileski R, Li XM, Zhang XC, Zhao SW, Kenakin T, Wang Q, Stevens RC, Peng W, Roth BL, Rao ZH, Liu ZJ

EMDB-28907:
Gi bound mu-opioid receptor in complex with beta-endorphin
Method: single particle / : Wang Y, Zhuang Y, DiBerto JF, Zhou XE, Schmitz GP, Yuan Q, Jain MK, Liu W, Melcher K, Jiang Y, Roth BL, Xu HE

EMDB-28908:
Gi bound mu-opioid receptor in complex with endomorphin
Method: single particle / : Wang Y, Zhuang Y, DiBerto JF, Zhou XE, Schmitz GP, Yuan Q, Jain MK, Liu W, Melcher K, Jiang Y, Roth BL, Xu HE

EMDB-28909:
Gi bound delta-opioid receptor in complex with deltorphin
Method: single particle / : Wang Y, Zhuang Y, DiBerto JF, Zhou XE, Schmitz GP, Yuan Q, Jain MK, Liu W, Melcher K, Jiang Y, Roth BL, Xu HE

EMDB-28911:
Gi bound kappa-opioid receptor in complex with dynorphin
Method: single particle / : Wang Y, Zhuang Y, DiBerto JF, Zhou XE, Schmitz GP, Yuan Q, Jain MK, Liu W, Melcher K, Jiang Y, Roth BL, Xu HE

EMDB-28912:
Gi bound nociceptin receptor in complex with nociceptin peptide
Method: single particle / : Wang Y, Zhuang Y, DiBerto JF, Zhou XE, Schmitz GP, Yuan Q, Jain MK, Liu W, Melcher K, Jiang Y, Roth BL, Xu HE

EMDB-26313:
C6-guano bound Mu Opioid Receptor-Gi Protein Complex
Method: single particle / : Wang H, Kobilka B

EMDB-25612:
CryoEM structure of mu-opioid receptor - Gi protein complex bound to mitragynine pseudoindoxyl (MP)
Method: single particle / : Seven AB, Qu Q, Robertson MJ, Wang H, Kobilka BK, Skiniotis G

EMDB-25613:
CryoEM structure of mu-opioid receptor - Gi protein complex bound to lofentanil (LFT)
Method: single particle / : Seven AB, Qu Q, Huang W, Robertson MJ, Kobilka BK, Skiniotis G

EMDB-24378:
5-HT2AR bound to a novel agonist in complex with a mini-Gq protein and an active-state stabilizing single-chain variable fragment (scFv16) obtained by cryo-electron microscopy (cryoEM)
Method: single particle / : Barros-Alvarez X, Kim K, Panova O, Roth BL, Skiniotis G

EMDB-26314:
C5guano-uOR-Gi-scFv16
Method: single particle / : Wang H, Qu Q, Skiniotis G, Kobilka B

EMDB-24896:
CryoEM structure of Gq-coupled MRGPRX2 with peptide agonist Cortistatin-14
Method: single particle / : Cao C, Fay JF, Gumpper RH, Roth BL

EMDB-24897:
CryoEM structure of Gi-coupled MRGPRX2 with peptide agonist Cortistatin-14
Method: single particle / : Cao C, Fay JF, Gumpper RH, Roth BL

EMDB-24898:
CryoEM structure of Gq-coupled MRGPRX2 with small molecule agonist (R)-Zinc-3573
Method: single particle / : Cao C, Fay JF, Gumpper RH, Roth BL

EMDB-24899:
CryoEM structure of Gi-coupled MRGPRX2 with small molecule agonist (R)-Zinc-3573
Method: single particle / : Cao C, Fay JF, Gumpper RH, Roth BL

EMDB-24900:
CryoEM structure of Gq-coupled MRGPRX4 with small molecule agonist MS47134
Method: single particle / : Cao C, Fay JF, Gumpper RH, Roth BL

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more